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crcB protein (Spirosoma linguale) - STRING interaction network
"crcB" - CrcB protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crcBCrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity (125 aa)    
Predicted Functional Partners:
tsaD
Glycoprotease family metalloendopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction (332 aa)
     
      0.859
Slin_5441
Hypothetical protein (490 aa)
              0.859
Slin_2635
HAD-superfamily hydrolase (216 aa)
     
      0.692
Slin_5443
Amino acid permease-associated protein (463 aa)
              0.611
Slin_5855
Cell division protein FtsK (856 aa)
     
      0.455
Slin_6555
Pseudouridine synthase (240 aa)
   
        0.405
Slin_4400
Pseudouridine synthase (248 aa)
   
        0.405
Slin_3406
Pseudouridine synthase (244 aa)
   
        0.405
Slin_2869
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (308 aa)
   
        0.405
Slin_1390
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (348 aa)
   
        0.405
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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