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Slin_5456 protein (Spirosoma linguale) - STRING interaction network
"Slin_5456" - MazE family transcriptional regulator in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5456MazE family transcriptional regulator (85 aa)    
Predicted Functional Partners:
Slin_5455
ModF family transcriptional regulator; Toxic component of a toxin-antitoxin (TA) module (107 aa)
 
          0.970
Slin_1137
Hypothetical protein (80 aa)
   
          0.715
Slin_1138
Hypothetical protein (69 aa)
   
          0.657
Slin_5457
Excinuclease ABC subunit A (997 aa)
              0.599
Slin_1613
Lipoprotein (345 aa)
   
          0.534
Slin_1443
Hypothetical protein (88 aa)
   
          0.507
Slin_5454
Hypothetical protein (792 aa)
              0.491
Slin_6155
Hypothetical protein (222 aa)
   
          0.457
Slin_5458
MgtC/SapB transporter (212 aa)
              0.443
Slin_4014
PilT protein domain-containing protein (137 aa)
   
          0.438
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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