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Slin_5458 protein (Spirosoma linguale) - STRING interaction network
"Slin_5458" - MgtC/SapB transporter in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5458MgtC/SapB transporter (212 aa)    
Predicted Functional Partners:
Slin_3556
ATPase P (836 aa)
 
 
  0.980
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (676 aa)
       
      0.956
atpB
ATP synthase F0 subunit alpha; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane (373 aa)
       
      0.878
Slin_4553
Transcriptional regulator (227 aa)
       
 
  0.867
Slin_3454
Transcriptional regulator (223 aa)
       
 
  0.867
Slin_0465
Transcriptional regulator (225 aa)
       
 
  0.867
Slin_5459
Hypothetical protein (212 aa)
              0.715
Slin_5457
Excinuclease ABC subunit A (997 aa)
              0.614
Slin_6391
Hypothetical protein (284 aa)
       
      0.604
Slin_4917
Hypothetical protein (301 aa)
       
      0.604
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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