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Slin_5468 protein (Spirosoma linguale) - STRING interaction network
"Slin_5468" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5468Hypothetical protein (210 aa)    
Predicted Functional Partners:
Slin_5469
Gluconate 2-dehydrogenase (acceptor) (526 aa)
 
          0.972
Slin_5471
Alpha/beta hydrolase fold protein (255 aa)
          0.924
Slin_5470
Glycoside hydrolase family protein (446 aa)
              0.771
Slin_4367
GMC oxidoreductase (554 aa)
 
          0.754
Slin_1371
Glucose-methanol-choline oxidoreductase (584 aa)
 
          0.602
Slin_2017
Glucose-methanol-choline oxidoreductase (581 aa)
 
          0.598
Slin_5467
Short-chain dehydrogenase/reductase SDR (305 aa)
              0.596
Slin_2290
Major facilitator superfamily protein (426 aa)
   
          0.494
Slin_2515
Glucose-methanol-choline oxidoreductase (518 aa)
 
          0.466
Slin_3240
Hypothetical protein (129 aa)
   
          0.452
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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