STRINGSTRING
Slin_5470 protein (Spirosoma linguale) - STRING interaction network
"Slin_5470" - Glycoside hydrolase family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5470Glycoside hydrolase family protein (446 aa)    
Predicted Functional Partners:
Slin_5471
Alpha/beta hydrolase fold protein (255 aa)
              0.859
Slin_5260
Glycosyltransferase (405 aa)
          0.854
Slin_0280
Group 1 glycosyl transferase (403 aa)
          0.854
Slin_5469
Gluconate 2-dehydrogenase (acceptor) (526 aa)
 
          0.802
Slin_5468
Hypothetical protein (210 aa)
              0.771
Slin_3854
Hypothetical protein (407 aa)
 
          0.766
Slin_4165
UDP-galactopyranose mutase (373 aa)
          0.659
Slin_2516
Glyoxalase/bleomycin resistance protein/dioxygenase (333 aa)
   
          0.583
Slin_2639
Glycoside hydrolase family protein (472 aa)
   
          0.560
Slin_5467
Short-chain dehydrogenase/reductase SDR (305 aa)
              0.540
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (15%) [HD]