STRINGSTRING
Slin_5501 protein (Spirosoma linguale) - STRING interaction network
"Slin_5501" - Metallophosphoesterase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5501Metallophosphoesterase (426 aa)    
Predicted Functional Partners:
Slin_5502
Hypothetical protein (444 aa)
              0.859
Slin_5503
Hypothetical protein (264 aa)
              0.622
Slin_5500
Dienelactone hydrolase (292 aa)
              0.550
Slin_1307
Outer membrane assembly lipoprotein YfiO (299 aa)
   
          0.503
Slin_5545
Hypothetical protein (165 aa)
   
          0.493
Slin_1306
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (103 aa)
   
          0.486
Slin_0543
DNA polymerase I (1024 aa)
              0.457
Slin_3045
Hypothetical protein (273 aa)
   
          0.433
recX
Regulatory protein RecX; Modulates RecA activity (151 aa)
   
          0.430
Slin_1599
ATP-dependent Clp protease adaptor protein ClpS (92 aa)
   
          0.419
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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