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Slin_5503 protein (Spirosoma linguale) - STRING interaction network
"Slin_5503" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5503Hypothetical protein (264 aa)    
Predicted Functional Partners:
Slin_3963
Hypothetical protein (223 aa)
   
          0.767
Slin_5501
Metallophosphoesterase (426 aa)
              0.622
Slin_5502
Hypothetical protein (444 aa)
              0.621
Slin_6191
Hypothetical protein (855 aa)
   
          0.565
Slin_4026
Xylose isomerase (311 aa)
   
          0.564
Slin_4869
Xylose isomerase (310 aa)
 
          0.477
Slin_6007
Endonuclease/exonuclease/phosphatase (1015 aa)
   
          0.477
Slin_3952
Hypothetical protein (327 aa)
   
          0.460
Slin_3037
Hypothetical protein (850 aa)
   
          0.455
Slin_3030
Hypothetical protein (506 aa)
 
          0.453
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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