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Slin_5520 protein (Spirosoma linguale) - STRING interaction network
"Slin_5520" - Type 12 methyltransferase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5520Type 12 methyltransferase (306 aa)    
Predicted Functional Partners:
gidA
Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 (620 aa)
              0.814
Slin_5518
Chromosome segregation ATPase (1100 aa)
              0.644
Slin_1252
Cell wall hydrolase/autolysin (347 aa)
   
          0.583
Slin_5211
Hypothetical protein (333 aa)
   
          0.581
Slin_3465
Hypothetical protein (350 aa)
   
          0.576
Slin_2067
Response regulator receiver protein (320 aa)
   
          0.545
Slin_5392
beta-N-acetylhexosaminidase (953 aa)
   
          0.541
Slin_4196
Glycoside hydrolase (1002 aa)
   
          0.511
Slin_3543
UspA domain-containing protein (293 aa)
   
          0.462
Slin_5288
Hypothetical protein (529 aa)
   
          0.459
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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