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Slin_5544 protein (Spirosoma linguale) - STRING interaction network
"Slin_5544" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5544Hypothetical protein (267 aa)    
Predicted Functional Partners:
Slin_5543
Hypothetical protein (456 aa)
          0.994
Slin_3931
Hypothetical protein (459 aa)
 
 
  0.912
Slin_0713
Electron transfer flavoprotein alpha/beta- subunit (245 aa)
   
  0.817
Slin_5545
Hypothetical protein (165 aa)
 
          0.738
Slin_0712
Electron transfer flavoprotein subunit alpha (320 aa)
 
   
  0.723
Slin_4424
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein (811 aa)
 
     
  0.708
Slin_5010
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit (645 aa)
 
   
  0.591
Slin_4693
L-lactate transport (589 aa)
   
   
  0.582
Slin_6109
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein (718 aa)
         
  0.574
Slin_5112
acyl-CoA dehydrogenase domain-containing protein (599 aa)
 
     
  0.573
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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