STRINGSTRING
Slin_5551 protein (Spirosoma linguale) - STRING interaction network
"Slin_5551" - Peptidase M28 in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5551Peptidase M28 (343 aa)    
Predicted Functional Partners:
Slin_1309
Hypothetical protein (614 aa)
   
          0.756
Slin_3223
Gliding motility-associated protein GldM (528 aa)
   
          0.755
Slin_3465
Hypothetical protein (350 aa)
   
          0.724
Slin_2018
Hypothetical protein (686 aa)
   
          0.719
Slin_5660
Outer membrane chaperone Skp (198 aa)
   
          0.716
Slin_5211
Hypothetical protein (333 aa)
   
          0.705
Slin_1509
Hypothetical protein (172 aa)
   
          0.703
Slin_5643
Hypothetical protein (145 aa)
   
          0.691
Slin_5550
Hypothetical protein (126 aa)
              0.685
cysS
cysteinyl-tRNA synthetase (499 aa)
              0.677
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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