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Slin_5553 protein (Spirosoma linguale) - STRING interaction network
"Slin_5553" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5553Hypothetical protein (398 aa)    
Predicted Functional Partners:
Slin_3535
Glycine C-acetyltransferase (434 aa)
 
          0.607
cysS
cysteinyl-tRNA synthetase (499 aa)
              0.605
Slin_5554
PfkB domain-containing protein (306 aa)
              0.601
Slin_2875
Hypothetical protein (843 aa)
 
          0.584
Slin_3158
Hypothetical protein (857 aa)
 
          0.579
Slin_1686
Short-chain dehydrogenase/reductase SDR (269 aa)
   
          0.547
Slin_4550
TonB-dependent receptor plug (1192 aa)
   
          0.522
Slin_0475
Hypothetical protein (195 aa)
   
          0.512
Slin_4954
TonB-dependent receptor plug (1182 aa)
   
          0.501
Slin_6350
Class I and II aminotransferase (360 aa)
 
          0.479
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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