STRINGSTRING
Slin_5554 protein (Spirosoma linguale) - STRING interaction network
"Slin_5554" - PfkB domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5554PfkB domain-containing protein (306 aa)    
Predicted Functional Partners:
Slin_4070
Oxidoreductase domain-containing protein (734 aa)
   
   
  0.675
Slin_0661
LmbE family protein (239 aa)
   
          0.672
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (436 aa)
   
 
  0.610
Slin_5553
Hypothetical protein (398 aa)
              0.601
Slin_3636
Major facilitator superfamily protein (411 aa)
   
          0.573
Slin_3632
Major facilitator superfamily protein (422 aa)
   
          0.555
Slin_3484
Group 1 glycosyl transferase (379 aa)
 
   
  0.551
Slin_5971
Amidophosphoribosyltransferase (630 aa)
   
 
  0.520
Slin_5545
Hypothetical protein (165 aa)
   
          0.513
bshC
Hypothetical protein (515 aa)
   
          0.512
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (7%) [HD]