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Slin_5556 protein (Spirosoma linguale) - STRING interaction network
"Slin_5556" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5556Hypothetical protein (243 aa)    
Predicted Functional Partners:
Slin_5555
Hypothetical protein (269 aa)
 
       
0.872
Slin_3072
anti-sigma-K factor RskA (274 aa)
   
          0.654
Slin_4809
phytanoyl-CoA dioxygenase (273 aa)
   
          0.626
Slin_3037
Hypothetical protein (850 aa)
   
          0.562
Slin_2866
Hypothetical protein (277 aa)
   
          0.531
Slin_4018
NmrA family protein (299 aa)
   
          0.524
Slin_0022
RagB/SusD domain-containing protein (562 aa)
   
          0.517
Slin_3817
NmrA family protein (297 aa)
   
          0.497
Slin_6631
Fatty acid desaturase (361 aa)
   
          0.468
Slin_4207
RagB/SusD domain-containing protein (451 aa)
   
          0.467
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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