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Slin_5563 protein (Spirosoma linguale) - STRING interaction network
"Slin_5563" - Class IV aminotransferase in Spirosoma linguale
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Slin_5563Class IV aminotransferase (283 aa)    
Predicted Functional Partners:
ilvD
Dihydroxy-acid dehydratase (569 aa)
   
  0.972
Slin_1829
Dihydroxy-acid dehydratase (568 aa)
   
  0.972
Slin_5897
Pyruvate carboxyltransferase (379 aa)
 
  0.964
Slin_4514
Aspartate kinase (818 aa)
   
  0.952
Slin_5637
Cystathionine gamma-lyase (379 aa)
     
  0.923
Slin_3333
Cystathionine gamma-synthase (393 aa)
     
  0.923
Slin_1506
Cystathionine gamma-synthase (373 aa)
     
  0.923
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is tranferred onto alpha-ketoisovalerate to form ketopantoate (272 aa)
       
  0.910
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate (311 aa)
   
 
  0.850
ilvA
Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA (424 aa)
   
 
  0.847
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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