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Slin_5605 protein (Spirosoma linguale) - STRING interaction network
"Slin_5605" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5605Hypothetical protein (361 aa)    
Predicted Functional Partners:
Slin_5604
Hypothetical protein (210 aa)
              0.880
Slin_5603
ECF subfamily RNA polymerase sigma-24 subunit (195 aa)
 
          0.797
Slin_4397
Hypothetical protein (303 aa)
   
          0.754
Slin_6188
TonB family protein (804 aa)
   
          0.730
Slin_1200
Hypothetical protein (232 aa)
 
          0.727
Slin_4960
Hypothetical protein (296 aa)
   
          0.720
Slin_6385
Hypothetical protein (694 aa)
   
          0.717
Slin_1687
Hypothetical protein (751 aa)
   
          0.688
Slin_1217
Hypothetical protein (700 aa)
   
          0.687
Slin_4760
TonB-dependent receptor plug (1100 aa)
   
          0.685
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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