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Slin_5616 protein (Spirosoma linguale) - STRING interaction network
"Slin_5616" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5616Hypothetical protein (451 aa)    
Predicted Functional Partners:
Slin_1094
ABC transporter (584 aa)
   
          0.751
Slin_1095
ABC transporter (587 aa)
   
          0.714
Slin_0846
Metallophosphoesterase (371 aa)
   
          0.714
Slin_1319
Hypothetical protein (110 aa)
   
          0.671
Slin_0637
Hypothetical protein (1066 aa)
   
          0.663
Slin_0594
Hypothetical protein (1053 aa)
   
          0.655
Slin_5615
Hypothetical protein (62 aa)
              0.652
Slin_5614
Hypothetical protein (261 aa)
              0.652
prmA
Ribosomal L11 methyltransferase; Methylates ribosomal protein L11 (276 aa)
              0.646
Slin_0987
Preprotein translocase subunit SecG (134 aa)
   
          0.634
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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