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Slin_5622 protein (Spirosoma linguale) - STRING interaction network
"Slin_5622" - Acetyl xylan esterase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5622Acetyl xylan esterase (407 aa)    
Predicted Functional Partners:
Slin_5488
Xylose isomerase (285 aa)
 
          0.781
Slin_6214
Oxidoreductase domain-containing protein (340 aa)
   
          0.767
Slin_0604
Oxidoreductase domain-containing protein (327 aa)
   
          0.765
Slin_1808
BNR/Asp-box repeat domain-containing protein (348 aa)
 
          0.741
Slin_1224
Hypothetical protein (879 aa)
   
          0.728
Slin_4778
G-D-S-L family lipolytic protein (417 aa)
   
          0.720
Slin_6336
Hypothetical protein (462 aa)
 
          0.718
Slin_2121
Hypothetical protein (1837 aa)
   
          0.703
Slin_2229
Acetyl xylan esterase (441 aa)
   
          0.691
Slin_0602
Hypothetical protein (453 aa)
   
          0.654
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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