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Slin_5626 protein (Spirosoma linguale) - STRING interaction network
"Slin_5626" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5626Hypothetical protein (337 aa)    
Predicted Functional Partners:
Slin_5625
SNF2-like protein (1185 aa)
 
          0.686
Slin_3405
Hypothetical protein (565 aa)
   
          0.662
Slin_2613
Hypothetical protein (201 aa)
   
          0.611
Slin_5738
Hypothetical protein (173 aa)
   
          0.545
Slin_5627
Anthranilate phosphoribosyltransferase-like protein (419 aa)
              0.504
Slin_3179
Glyoxalase/bleomycin resistance protein/dioxygenase (118 aa)
   
          0.472
Slin_2327
Hypothetical protein (189 aa)
   
          0.460
Slin_2272
Hypothetical protein (186 aa)
   
          0.459
Slin_3833
N-acetyltransferase GCN5 (172 aa)
   
          0.451
Slin_3780
Hypothetical protein (182 aa)
   
          0.443
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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