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Slin_5630 protein (Spirosoma linguale) - STRING interaction network
"Slin_5630" - seryl-tRNA synthetase in Spirosoma linguale
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5630seryl-tRNA synthetase (423 aa)    
Predicted Functional Partners:
Slin_3968
L-seryl-tRNA(ser) selenium transferase protein (406 aa)
     
 
  0.911
Slin_3964
Pyridoxal phosphate-dependent enzyme (407 aa)
     
 
  0.911
pheT
phenylalanyl-tRNA synthetase subunit beta (814 aa)
 
   
  0.911
thrS
threonyl-tRNA synthetase (647 aa)
 
 
  0.897
gyrB
DNA gyrase subunit beta; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (666 aa)
 
   
  0.867
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (890 aa)
   
 
  0.865
glyQS
glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly) (502 aa)
     
   
  0.846
cysS
cysteinyl-tRNA synthetase (499 aa)
 
   
  0.844
lysS
lysyl-tRNA synthetase (583 aa)
 
 
  0.839
pheS
phenylalanyl-tRNA synthetase subunit alpha (346 aa)
   
   
  0.832
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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