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Slin_5668 protein (Spirosoma linguale) - STRING interaction network
"Slin_5668" - Cytochrome C class I in Spirosoma linguale
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5668Cytochrome C class I (203 aa)    
Predicted Functional Partners:
Slin_5667
Hypothetical protein (177 aa)
 
          0.967
Slin_5669
Hypothetical protein (436 aa)
 
          0.937
Slin_5666
Polysulfide reductase NrfD (476 aa)
 
          0.934
Slin_5665
Iron-sulfur binding oxidoreductase (1037 aa)
 
          0.911
Slin_5664
Cytochrome C class I (443 aa)
 
          0.898
Slin_5670
Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (373 aa)
 
          0.751
Slin_5675
Cytochrome C oxidase subunit III (265 aa)
 
          0.702
Slin_5671
Cytochrome-c oxidase (627 aa)
              0.674
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group (292 aa)
              0.650
Slin_5677
Electron transporter SCO1/SenC (236 aa)
 
          0.637
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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