STRINGSTRING
Slin_5678 protein (Spirosoma linguale) - STRING interaction network
"Slin_5678" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5678Hypothetical protein (180 aa)    
Predicted Functional Partners:
Slin_5677
Electron transporter SCO1/SenC (236 aa)
          0.984
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group (292 aa)
 
          0.927
Slin_5675
Cytochrome C oxidase subunit III (265 aa)
 
          0.927
Slin_5676
Hypothetical protein (107 aa)
 
          0.919
Slin_5671
Cytochrome-c oxidase (627 aa)
 
          0.917
Slin_5680
Hypothetical protein (125 aa)
 
          0.904
Slin_5674
Cytochrome C oxidase subunit III (196 aa)
 
          0.893
Slin_5670
Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (373 aa)
 
          0.892
Slin_5679
Hypothetical protein (91 aa)
 
          0.867
Slin_5146
Electron transporter SCO1/SenC (228 aa)
          0.849
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (8%) [HD]