STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5679Hypothetical protein. (91 aa)    
Predicted Functional Partners:
Slin_5680
KEGG: rpe:RPE_4757 protein of unknown function DUF983.
 
     0.900
Slin_5675
PFAM: cytochrome c oxidase subunit III; KEGG: lch:Lcho_0251 cytochrome c oxidase subunit III.
 
     0.831
Slin_5676
KEGG: rso:RS02124 hypothetical protein.
 
     0.819
Slin_5678
PFAM: protein of unknown function DUF420; KEGG: scl:sce6560 hypothetical protein.
 
     0.816
Slin_5677
PFAM: electron transport protein SCO1/SenC; KEGG: afw:Anae109_2865 electron transport protein SCO1/SenC.
 
     0.805
Slin_5674
PFAM: cytochrome c oxidase subunit III; KEGG: sme:SMc01984 cytochrome-C oxidase transmembrane protein.
 
     0.748
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
     0.739
Slin_5672
PFAM: cytochrome oxidase assembly; KEGG: mca:MCA1778 cytochrome oxidase assembly protein.
 
     0.738
Slin_5670
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
     0.686
Slin_5671
PFAM: cytochrome c oxidase subunit I; KEGG: bur:Bcep18194_C7361 cytochrome-c oxidase; Belongs to the heme-copper respiratory oxidase family.
       0.677
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.