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Slin_5682 protein (Spirosoma linguale) - STRING interaction network
"Slin_5682" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5682Hypothetical protein (307 aa)    
Predicted Functional Partners:
Slin_5681
ECF subfamily RNA polymerase sigma-24 subunit (199 aa)
              0.859
Slin_5684
Epimerase (276 aa)
              0.756
Slin_5683
Hypothetical protein (330 aa)
              0.756
Slin_5680
Hypothetical protein (125 aa)
              0.576
Slin_5679
Hypothetical protein (91 aa)
              0.576
Slin_5678
Hypothetical protein (180 aa)
              0.556
Slin_5677
Electron transporter SCO1/SenC (236 aa)
              0.544
Slin_5676
Hypothetical protein (107 aa)
              0.544
Slin_5675
Cytochrome C oxidase subunit III (265 aa)
              0.528
Slin_5674
Cytochrome C oxidase subunit III (196 aa)
              0.504
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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