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Slin_5698 protein (Spirosoma linguale) - STRING interaction network
"Slin_5698" - N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5698N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase (340 aa)    
Predicted Functional Partners:
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) (306 aa)
              0.644
cutC
CutC family protein; Involved in copper homeostasis (263 aa)
 
          0.608
Slin_5697
Glycogen(starch) synthase (606 aa)
   
        0.605
Slin_5696
Hypothetical protein (164 aa)
              0.598
Slin_5695
Hypothetical protein (72 aa)
              0.598
Slin_5694
Molybdenum cofactor synthesis protein (174 aa)
              0.567
Slin_2367
Peptidase M14, carboxypeptidase A (580 aa)
   
          0.487
Slin_5706
Peptidase S58 DmpA (375 aa)
 
          0.460
Slin_4208
Cyanophycinase-like protein (333 aa)
            0.425
Slin_4154
Cyanophycinase (279 aa)
         
  0.417
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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