STRINGSTRING
cutC protein (Spirosoma linguale) - STRING interaction network
"cutC" - CutC family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutCCutC family protein; Involved in copper homeostasis (263 aa)    
Predicted Functional Partners:
Slin_2932
N-acetylglucosamine-6-phosphate deacetylase (389 aa)
 
          0.683
Slin_2796
alpha-L-fucosidase (581 aa)
 
          0.678
Slin_6212
N-acetylglucosamine-6-phosphate deacetylase (398 aa)
 
          0.630
Slin_3975
beta-N-acetylhexosaminidase (605 aa)
 
          0.628
Slin_4336
beta-N-acetylhexosaminidase (553 aa)
 
          0.624
Slin_3893
beta-N-acetylhexosaminidase (760 aa)
 
          0.624
Slin_1127
alpha-L-fucosidase (479 aa)
 
          0.623
Slin_6221
beta-N-acetylhexosaminidase (795 aa)
 
          0.619
Slin_2031
beta-N-acetylhexosaminidase (762 aa)
 
          0.618
Slin_5698
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase (340 aa)
 
          0.608
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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