STRINGSTRING
Slin_5703 protein (Spirosoma linguale) - STRING interaction network
"Slin_5703" - Transcriptional regulator in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5703Transcriptional regulator (222 aa)    
Predicted Functional Partners:
Slin_5160
Hypothetical protein (692 aa)
   
          0.687
Slin_5704
Oligopeptide transporter OPT family (688 aa)
              0.621
Slin_4333
FG-GAP repeat-containing protein (758 aa)
   
          0.561
Slin_0714
Hypothetical protein (109 aa)
   
          0.560
Slin_3860
O-antigen polymerase (494 aa)
   
          0.553
Slin_6247
Hypothetical protein (499 aa)
   
          0.534
Slin_2312
Hypothetical protein (526 aa)
   
          0.529
Slin_5702
Fatty acid hydroxylase (158 aa)
              0.518
Slin_3626
Hypothetical protein (186 aa)
   
          0.498
Slin_3058
Hypothetical protein (289 aa)
   
          0.494
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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