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Slin_5706 protein (Spirosoma linguale) - STRING interaction network
"Slin_5706" - Peptidase S58 DmpA in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5706Peptidase S58 DmpA (375 aa)    
Predicted Functional Partners:
Slin_5707
Hypothetical protein (100 aa)
              0.655
Slin_5708
Chaperone DnaJ domain-containing protein (301 aa)
              0.502
Slin_4155
Beta-aspartyl-peptidase (306 aa)
 
          0.485
Slin_5698
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase (340 aa)
 
          0.460
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis (280 aa)
   
        0.408
Slin_0632
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP (505 aa)
   
        0.405
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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