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Slin_5707 protein (Spirosoma linguale) - STRING interaction network
"Slin_5707" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5707Hypothetical protein (100 aa)    
Predicted Functional Partners:
Slin_5708
Chaperone DnaJ domain-containing protein (301 aa)
 
          0.939
Slin_1885
Hypothetical protein (440 aa)
   
          0.678
Slin_1252
Cell wall hydrolase/autolysin (347 aa)
   
          0.673
Slin_5706
Peptidase S58 DmpA (375 aa)
              0.655
Slin_3543
UspA domain-containing protein (293 aa)
   
          0.619
Slin_2373
Hypothetical protein (619 aa)
   
          0.536
Slin_1160
Hypothetical protein (100 aa)
   
          0.534
Slin_0216
Hypothetical protein (108 aa)
   
          0.531
Slin_3186
Type 12 methyltransferase (245 aa)
   
          0.511
Slin_3191
Acyl carrier protein (86 aa)
   
          0.504
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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