STRINGSTRING
Slin_5728 protein (Spirosoma linguale) - STRING interaction network
"Slin_5728" - OmpA/MotB domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5728OmpA/MotB domain-containing protein (294 aa)    
Predicted Functional Partners:
Slin_3103
CheB methylesterase (344 aa)
 
   
  0.814
Slin_5265
CheB methylesterase (329 aa)
 
   
  0.813
Slin_1032
CheB methylesterase (203 aa)
 
   
  0.795
Slin_2738
OmpA/MotB domain-containing protein (241 aa)
   
 
 
  0.793
Slin_0644
OmpA/MotB domain-containing protein (306 aa)
   
 
 
  0.791
Slin_4205
OmpA/MotB domain-containing protein (427 aa)
   
 
 
  0.754
Slin_1781
OmpA/MotB domain-containing protein (658 aa)
   
 
 
  0.743
Slin_0046
OmpA/MotB domain-containing protein (432 aa)
   
 
 
  0.741
Slin_3102
Signal transduction histidine kinase with CheB and CheR activity (1418 aa)
 
   
  0.731
Slin_5203
OmpA/MotB domain-containing protein (668 aa)
   
 
 
  0.710
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (11%) [HD]