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Slin_5730 protein (Spirosoma linguale) - STRING interaction network
"Slin_5730" - Proline dehydrogenase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5730Proline dehydrogenase (363 aa)    
Predicted Functional Partners:
Slin_5523
Delta-1-pyrroline-5-carboxylate dehydrogenase (543 aa)
  0.980
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline (267 aa)
     
  0.910
Slin_3362
Proline-specific peptidase; Releases the N-terminal proline from various substrates (346 aa)
         
    0.900
Slin_2045
Histidine kinase (906 aa)
   
   
  0.742
Slin_6588
Sodium solute transporter (529 aa)
   
   
  0.738
Slin_5240
Na+/solute symporter (460 aa)
   
   
  0.738
Slin_2416
Na+/solute symporter (575 aa)
   
   
  0.738
Slin_1640
Sodium solute transporter (566 aa)
   
   
  0.738
Slin_1598
Na+/solute symporter (487 aa)
   
   
  0.738
lspA
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins (261 aa)
              0.669
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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