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Slin_5796 protein (Spirosoma linguale) - STRING interaction network
"Slin_5796" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5796Hypothetical protein (521 aa)    
Predicted Functional Partners:
Slin_6210
Heme-binding protein (1141 aa)
   
          0.777
Slin_3373
DinB family protein (181 aa)
   
          0.767
Slin_5797
RagB/SusD domain-containing protein (601 aa)
 
          0.739
Slin_4939
Hypothetical protein (360 aa)
   
          0.724
Slin_0335
PKD domain-containing protein (984 aa)
   
          0.722
Slin_4231
Lantibiotic dehydratase domain-containing protein (962 aa)
   
          0.719
Slin_5487
Dehydrogenase (1023 aa)
   
          0.699
Slin_4672
PKD domain-containing protein (941 aa)
   
          0.680
Slin_3034
ASPIC/UnbV domain-containing protein (1129 aa)
   
          0.679
Slin_3980
FG-GAP repeat-containing protein (1126 aa)
   
          0.663
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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