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Slin_5815 protein (Spirosoma linguale) - STRING interaction network
"Slin_5815" - Nicotinamide mononucleotide transporter PnuC in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5815Nicotinamide mononucleotide transporter PnuC (224 aa)    
Predicted Functional Partners:
Slin_5816
Oxidoreductase domain-containing protein (397 aa)
              0.645
Slin_2937
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate (352 aa)
         
  0.572
Slin_5814
Hypothetical protein (136 aa)
              0.531
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (432 aa)
              0.515
Slin_5636
TonB-dependent receptor (793 aa)
 
          0.488
hisI
phosphoribosyl-ATP diphosphatase (202 aa)
              0.456
Slin_2799
Thiamine pyrophosphokinase (220 aa)
         
  0.407
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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