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Slin_5822 protein (Spirosoma linguale) - STRING interaction network
"Slin_5822" - Iron-sulfur cluster assembly accessory protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5822Iron-sulfur cluster assembly accessory protein (108 aa)    
Predicted Functional Partners:
Slin_0175
FeS assembly ATPase SufC (251 aa)
   
 
  0.782
Slin_3608
FeS assembly protein SufB (497 aa)
   
 
  0.717
Slin_0174
FeS assembly protein SufD (441 aa)
   
 
  0.717
Slin_5027
2-oxoglutarate dehydrogenase, E1 subunit (932 aa)
   
        0.697
Slin_0166
Cysteine desulfurase (412 aa)
   
 
  0.668
Slin_4680
Cysteine desulfurase (372 aa)
 
   
  0.664
Slin_6132
Class V aminotransferase (422 aa)
   
 
  0.661
Slin_2612
Class V aminotransferase (399 aa)
   
 
  0.661
Slin_2438
Class V aminotransferase (398 aa)
   
 
  0.661
Slin_1785
Class V aminotransferase (394 aa)
   
 
  0.661
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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