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Slin_5833 protein (Spirosoma linguale) - STRING interaction network
"Slin_5833" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5833Hypothetical protein (113 aa)    
Predicted Functional Partners:
Slin_0161
Hypothetical protein (143 aa)
   
          0.770
Slin_5832
Hypothetical protein (102 aa)
 
          0.764
Slin_5738
Hypothetical protein (173 aa)
   
          0.703
Slin_2272
Hypothetical protein (186 aa)
 
          0.618
Slin_3780
Hypothetical protein (182 aa)
   
          0.609
Slin_3484
Group 1 glycosyl transferase (379 aa)
   
          0.587
bshC
Hypothetical protein (515 aa)
   
          0.563
Slin_5831
3-deoxy-D-manno-octulosonic-acid transferase (416 aa)
              0.546
Slin_4879
Hypothetical protein (170 aa)
   
          0.526
Slin_4060
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (334 aa)
   
          0.514
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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