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Slin_5835 protein (Spirosoma linguale) - STRING interaction network
"Slin_5835" - DivIVA domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5835DivIVA domain-containing protein (298 aa)    
Predicted Functional Partners:
Slin_5834
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin (116 aa)
              0.731
Slin_5836
Hypothetical protein (304 aa)
 
          0.689
Slin_5122
Hypothetical protein (1005 aa)
   
          0.652
Slin_2013
Hypothetical protein (597 aa)
   
          0.636
Slin_3587
Hypothetical protein (1087 aa)
   
          0.575
Slin_0279
Hypothetical protein (557 aa)
   
          0.571
Slin_4988
Colicin V production protein (181 aa)
   
          0.568
Slin_3223
Gliding motility-associated protein GldM (528 aa)
   
          0.561
Slin_2018
Hypothetical protein (686 aa)
   
          0.543
Slin_0786
Hypothetical protein (293 aa)
   
          0.541
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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