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Slin_5836 protein (Spirosoma linguale) - STRING interaction network
"Slin_5836" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5836Hypothetical protein (304 aa)    
Predicted Functional Partners:
Slin_5837
4’-phosphopantetheinyl transferase (209 aa)
 
          0.723
Slin_5835
DivIVA domain-containing protein (298 aa)
 
          0.689
Slin_1448
Cytochrome C biogenesis protein CcmB (224 aa)
   
          0.687
Slin_5981
Hypothetical protein (298 aa)
   
          0.662
Slin_6555
Pseudouridine synthase (240 aa)
   
          0.626
Slin_1475
Hypothetical protein (467 aa)
 
          0.618
Slin_5838
Hypothetical protein (291 aa)
   
          0.603
Slin_2710
Peptidase M50 (388 aa)
   
          0.596
Slin_2797
Hypothetical protein (1343 aa)
   
          0.573
Slin_5122
Hypothetical protein (1005 aa)
   
          0.564
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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