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Slin_5838 protein (Spirosoma linguale) - STRING interaction network
"Slin_5838" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5838Hypothetical protein (291 aa)    
Predicted Functional Partners:
Slin_0526
Hypothetical protein (354 aa)
   
          0.705
Slin_5161
Hypothetical protein (428 aa)
   
          0.702
Slin_1448
Cytochrome C biogenesis protein CcmB (224 aa)
   
          0.696
Slin_2797
Hypothetical protein (1343 aa)
   
          0.665
Slin_0714
Hypothetical protein (109 aa)
   
          0.656
Slin_5839
UDP-glucose 4-epimerase (343 aa)
              0.628
Slin_5836
Hypothetical protein (304 aa)
   
          0.603
Slin_5122
Hypothetical protein (1005 aa)
   
          0.603
Slin_5981
Hypothetical protein (298 aa)
   
          0.598
Slin_0784
Hypothetical protein (466 aa)
   
          0.585
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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