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Slin_5854 protein (Spirosoma linguale) - STRING interaction network
"Slin_5854" - Outer membrane lipoprotein carrier protein LolA in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5854Outer membrane lipoprotein carrier protein LolA (213 aa)    
Predicted Functional Partners:
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (230 aa)
   
          0.772
Slin_3080
Hypothetical protein (1564 aa)
 
          0.761
Slin_6518
Hypothetical protein (309 aa)
   
          0.747
Slin_2038
Hypothetical protein (1024 aa)
   
          0.747
Slin_5539
Hypothetical protein (329 aa)
   
          0.746
Slin_1309
Hypothetical protein (614 aa)
   
          0.744
Slin_5251
Hypothetical protein (182 aa)
   
          0.740
Slin_4903
Organic solvent tolerance protein OstA-like protein (1210 aa)
   
          0.739
Slin_3224
Gliding motility-associated protein GldL (272 aa)
   
          0.735
Slin_2018
Hypothetical protein (686 aa)
   
          0.715
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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