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Slin_5874 protein (Spirosoma linguale) - STRING interaction network
"Slin_5874" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5874Hypothetical protein (245 aa)    
Predicted Functional Partners:
Slin_4895
Gliding motility-associated lipoprotein GldD (195 aa)
   
          0.773
Slin_5539
Hypothetical protein (329 aa)
   
          0.764
Slin_4905
Gliding-associated ABC transporter substrate-binding protein GldG (555 aa)
   
          0.758
Slin_3022
Hypothetical protein (174 aa)
   
          0.758
Slin_1599
ATP-dependent Clp protease adaptor protein ClpS (92 aa)
   
          0.756
Slin_5545
Hypothetical protein (165 aa)
   
          0.748
Slin_3583
Hypothetical protein (313 aa)
   
          0.719
Slin_0008
Hypothetical protein (263 aa)
   
          0.719
rpmF
50S ribosomal protein L32 (64 aa)
   
          0.708
Slin_5875
Hypothetical protein (134 aa)
              0.703
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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