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Slin_5875 protein (Spirosoma linguale) - STRING interaction network
"Slin_5875" - Hypothetical protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5875Hypothetical protein (134 aa)    
Predicted Functional Partners:
Slin_3563
Cytochrome oxidase maturation protein, cbb3- type (71 aa)
   
          0.774
Slin_5680
Hypothetical protein (125 aa)
   
          0.769
Slin_1648
Hypothetical protein (124 aa)
   
          0.759
Slin_3994
TetR family transcriptional regulator (238 aa)
   
          0.741
Slin_5518
Chromosome segregation ATPase (1100 aa)
   
          0.736
lipB
Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate (245 aa)
              0.731
Slin_5521
Hypothetical protein (607 aa)
   
          0.720
Slin_3018
Hypothetical protein (123 aa)
   
          0.717
Slin_3235
Hypothetical protein (154 aa)
   
          0.716
Slin_0577
Hypothetical protein (422 aa)
   
          0.708
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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