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Slin_5877 protein (Spirosoma linguale) - STRING interaction network
"Slin_5877" - Hypothetical protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5877Hypothetical protein (117 aa)    
Predicted Functional Partners:
Slin_4052
Mg chelatase subunit ChlI (513 aa)
 
        0.854
Slin_5516
Phosphoribosyltransferase (239 aa)
 
        0.811
Slin_2383
DNA protecting protein DprA (370 aa)
 
        0.802
lipB
Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate (245 aa)
              0.659
Slin_5878
Peptidase S41 (494 aa)
              0.585
Slin_1920
ComEC/Rec2-like protein (708 aa)
   
        0.584
Slin_5875
Hypothetical protein (134 aa)
              0.491
Slin_6394
Peptidase M22 glycoprotease (235 aa)
 
        0.472
rnhB
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (191 aa)
   
      0.471
Slin_2563
Sugar isomerase (185 aa)
 
        0.469
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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