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Slin_5888 protein (Spirosoma linguale) - STRING interaction network
"Slin_5888" - Adenosylmethionine-8-amino-7-oxononanoate aminotransferase in Spirosoma linguale
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5888Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (423 aa)    
Predicted Functional Partners:
bioD
Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring (210 aa)
 
  0.999
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism (330 aa)
   
  0.990
Slin_5561
8-amino-7-oxononanoate synthase (395 aa)
   
  0.956
Slin_3535
Glycine C-acetyltransferase (434 aa)
   
  0.855
Slin_5889
Phosphatase KdsC (170 aa)
              0.759
Slin_6350
Class I and II aminotransferase (360 aa)
 
   
  0.712
Slin_4972
phytanoyl-CoA dioxygenase (277 aa)
     
        0.650
Slin_5891
Hypothetical protein (350 aa)
   
   
  0.611
Slin_5890
Fmu (Sun) domain-containing protein (453 aa)
   
        0.555
Slin_3003
biotin--acetyl-CoA-carboxylase ligase (269 aa)
   
   
  0.468
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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