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Slin_5890 protein (Spirosoma linguale) - STRING interaction network
"Slin_5890" - Fmu in Spirosoma linguale
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5890Fmu (Sun) domain-containing protein (453 aa)    
Predicted Functional Partners:
Slin_5663
RNA binding S1 domain-containing protein (595 aa)
     
 
  0.919
Slin_5891
Hypothetical protein (350 aa)
   
        0.861
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (271 aa)
 
 
  0.860
rplJ
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (177 aa)
     
      0.847
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (510 aa)
   
        0.820
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (241 aa)
   
 
  0.815
rplR
50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (117 aa)
     
      0.763
Slin_1193
Inosine-5’-monophosphate dehydrogenase (490 aa)
   
      0.755
rnr
Ribonuclease R; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (825 aa)
 
      0.731
Slin_1688
TrmA family RNA methyltransferase (476 aa)
   
 
  0.717
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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