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Slin_5910 protein (Spirosoma linguale) - STRING interaction network
"Slin_5910" - Hypothetical protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5910Hypothetical protein (77 aa)    
Predicted Functional Partners:
Slin_5909
Hypothetical protein (128 aa)
              0.859
Slin_3433
Hypothetical protein (122 aa)
 
 
 
  0.828
ilvA
Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA (424 aa)
              0.787
Slin_4513
Hypothetical protein (78 aa)
   
          0.778
Slin_1443
Hypothetical protein (88 aa)
   
          0.598
Slin_0051
Hypothetical protein (151 aa)
 
          0.573
Slin_5908
AraC family transcriptional regulator (286 aa)
              0.569
Slin_0491
Hypothetical protein (135 aa)
   
          0.521
Slin_1011
Hypothetical protein (153 aa)
 
          0.515
Slin_5912
Ketol-acid reductoisomerase (347 aa)
              0.515
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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