STRINGSTRING
Slin_5917 protein (Spirosoma linguale) - STRING interaction network
"Slin_5917" - N-acyl-D-glucosamine 2-epimerase-like protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5917N-acyl-D-glucosamine 2-epimerase-like protein (415 aa)    
Predicted Functional Partners:
Slin_2624
Kelch repeat-containing protein (372 aa)
 
          0.719
Slin_6381
N-acylglucosamine 2-epimerase (427 aa)
   
          0.702
Slin_2625
Dihydrodipicolinate synthetase (315 aa)
 
          0.683
Slin_0615
Hypothetical protein (528 aa)
   
          0.600
Slin_2622
Hypothetical protein (521 aa)
 
          0.598
lon
ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner (829 aa)
              0.593
Slin_3979
Hypothetical protein (517 aa)
   
          0.588
Slin_4979
TonB-dependent receptor plug (1188 aa)
   
          0.573
Slin_4978
RagB/SusD domain-containing protein (576 aa)
   
          0.530
Slin_1163
Glycosidase PH1107-like protein (496 aa)
 
     
  0.525
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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