STRINGSTRING
Slin_5939 protein (Spirosoma linguale) - STRING interaction network
"Slin_5939" - Biopolymertransporter ExbD/TolR in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5939Biopolymertransporter ExbD/TolR (130 aa)    
Predicted Functional Partners:
Slin_5938
MotA/TolQ/ExbB proton channel (236 aa)
 
          0.868
Slin_2038
Hypothetical protein (1024 aa)
 
          0.736
Slin_0987
Preprotein translocase subunit SecG (134 aa)
   
          0.650
Slin_1159
Hypothetical protein (144 aa)
   
          0.645
Slin_5927
Hypothetical protein (168 aa)
   
          0.601
Slin_5539
Hypothetical protein (329 aa)
   
          0.584
Slin_2039
Hypothetical protein (558 aa)
 
          0.565
Slin_2569
Hypothetical protein (373 aa)
   
          0.558
Slin_4895
Gliding motility-associated lipoprotein GldD (195 aa)
   
          0.526
Slin_3583
Hypothetical protein (313 aa)
   
          0.523
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (12%) [HD]