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Slin_5965 protein (Spirosoma linguale) - STRING interaction network
"Slin_5965" - PSP1 domain-containing protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5965PSP1 domain-containing protein (398 aa)    
Predicted Functional Partners:
rny
Metal dependent phosphohydrolase; Endoribonuclease that initiates mRNA decay (536 aa)
 
          0.763
purD
Phosphoribosylamine/glycine ligase (428 aa)
              0.645
Slin_6028
Phosphoesterase RecJ domain-containing protein (343 aa)
   
          0.546
Slin_3481
MazG nucleotide pyrophosphohydrolase (108 aa)
 
          0.540
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (682 aa)
              0.515
Slin_3227
Uroporphyrinogen III synthase HEM4 (261 aa)
   
          0.491
Slin_1116
Alanine racemase domain-containing protein (219 aa)
 
          0.490
Slin_5963
ATP-dependent DNA helicase RecQ (736 aa)
              0.477
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (318 aa)
     
      0.473
Slin_3220
Glycosyl transferase family protein (785 aa)
         
  0.466
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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