STRINGSTRING
Slin_5970 protein (Spirosoma linguale) - STRING interaction network
"Slin_5970" - PA-phosphatase-like phosphoesterase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5970PA-phosphatase-like phosphoesterase (212 aa)    
Predicted Functional Partners:
Slin_5969
Gliding motility-associated lipoprotein GldH (158 aa)
 
          0.854
Slin_2918
PA-phosphatase-like phosphoesterase (191 aa)
   
          0.701
Slin_5968
CopY family transcriptional regulator (119 aa)
              0.595
Slin_5971
Amidophosphoribosyltransferase (630 aa)
              0.583
Slin_0482
Glycosyl transferase family protein (554 aa)
 
          0.574
Slin_2393
Hypothetical protein (299 aa)
   
          0.548
Slin_3402
Haloacid dehalogenase (244 aa)
   
          0.470
Slin_5967
Peptidase M56 BlaR1 (621 aa)
              0.425
Slin_5966
Hypothetical protein (319 aa)
              0.422
Slin_5366
Hypothetical protein (556 aa)
   
          0.404
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (10%) [HD]