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Slin_5986 protein (Spirosoma linguale) - STRING interaction network
"Slin_5986" - phytanoyl-CoA dioxygenase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_5986phytanoyl-CoA dioxygenase (344 aa)    
Predicted Functional Partners:
Slin_0325
Cell surface receptor IPT/TIG domain-containing protein (597 aa)
   
          0.683
Slin_5985
Gliding motility-associated protein GldE (453 aa)
 
          0.639
Slin_5984
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism (171 aa)
              0.504
Slin_0519
Hypothetical protein (239 aa)
   
          0.497
Slin_5983
A/G-specific adenine glycosylase (362 aa)
 
          0.467
Slin_6046
D-aminoacylase domain-containing protein (530 aa)
   
          0.467
Slin_2581
Hypothetical protein (335 aa)
   
          0.466
Slin_2577
Hypothetical protein (356 aa)
   
          0.456
Slin_4524
Biotin carboxylase (403 aa)
   
          0.429
Slin_1280
Penicillin-binding protein transpeptidase (1323 aa)
   
          0.422
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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