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Slin_6009 protein (Spirosoma linguale) - STRING interaction network
"Slin_6009" - RND family efflux transporter MFP subunit in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_6009RND family efflux transporter MFP subunit (356 aa)    
Predicted Functional Partners:
Slin_6008
Acriflavin resistance protein (1026 aa)
 
   
  0.935
Slin_6010
Outer membrane efflux protein (462 aa)
 
          0.876
Slin_2558
Acriflavin resistance protein (1035 aa)
 
   
  0.778
Slin_3717
Acriflavin resistance protein (1055 aa)
 
   
  0.767
Slin_4494
Acriflavin resistance protein (1049 aa)
 
   
  0.740
Slin_2817
Acriflavin resistance protein (1053 aa)
 
   
  0.740
Slin_1020
Acriflavin resistance protein (1037 aa)
 
   
  0.712
Slin_2616
Acriflavin resistance protein (1087 aa)
 
   
  0.658
Slin_0461
Acriflavin resistance protein (1075 aa)
 
   
  0.647
Slin_0256
Acriflavin resistance protein (1104 aa)
 
   
  0.623
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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